PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 231344
Common NameSELMODRAFT_231344, TGA_g2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family bZIP
Protein Properties Length: 319aa    MW: 35563.1 Da    PI: 8.6533
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
231344genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.8e-103473443
            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
            +k  rr+++NReAAr+sR+RKka++++Le    +L +  +
  231344 34 SKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLNQLEQ 73
            6889*************************86555544444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-83077No hitNo description
SMARTSM003386.3E-63194IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2553377IPR004827Basic-leucine zipper domain
CDDcd147081.04E-213587No hitNo description
PfamPF001703.1E-73574IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-83578No hitNo description
PROSITE patternPS0003603853IPR004827Basic-leucine zipper domain
PfamPF141446.3E-35118193IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MADSSPQKGN STDDGDQKSE DGPLTPSSTK NLDSKTLRRL AQNREAARKS RLRKKAYVQQ  60
LESSRVKLNQ LEQELQRARQ QGFYLGGYSN DQSHAAASSG AAAFDMEYGR WLEEQQRQMT  120
ELRTSLQAHV SDDELRVLVD AAMSHYDEIF RLKTAAAKSD VFHLVSGMWK TPAERCFMWM  180
GGFRPSELLK ILIPQLEPLT EQQLMGICNL QQSSQQAEDA LSQGMEALQQ SLADTLATGS  240
LGAASNVANY MGQMAMAMGK LGTLENFVRQ ADNLRHQTLQ QMHRILTTRQ AARAFLAIGD  300
YFGRLRALSS LWAARPRE*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002969636.10.0hypothetical protein SELMODRAFT_231344
SwissprotQ415581e-162HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLD8REU40.0D8REU4_SELML; Putative uncharacterized protein TGA_g2
STRINGEFJ297240.0(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-139bZIP family protein
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]